| Standings | P | W | D | L | GD | PTS | |
|---|---|---|---|---|---|---|---|
| 1 | FC Zlin | 27 | 19 | 7 | 1 | 29 | 64 |
| 2 | MFK Chrudim | 27 | 15 | 6 | 6 | 19 | 51 |
| 3 | Vyskov | 27 | 10 | 10 | 7 | 6 | 40 |
| 4 | FC Vlasim | 27 | 8 | 12 | 7 | 3 | 36 |
| 5 | Zizkov | 27 | 10 | 6 | 11 | 1 | 36 |
| 6 | Lisen | 27 | 8 | 12 | 7 | -3 | 36 |
| 7 | FC Silon Taborsko | 27 | 9 | 8 | 10 | 1 | 35 |
| 8 | Sparta Praha II | 27 | 8 | 10 | 9 | 1 | 34 |
| 9 | FC Zbrojovka Brno | 27 | 8 | 10 | 9 | -3 | 34 |
| 10 | Vysocina Jihlava | 27 | 8 | 10 | 9 | -4 | 34 |
| 11 | Opava | 27 | 9 | 7 | 11 | -8 | 34 |
| 12 | SK Prostejov | 27 | 8 | 10 | 9 | -9 | 34 |
| 13 | Slavia Prague II | 27 | 8 | 9 | 10 | 6 | 33 |
| 14 | Baník Ostrava II | 27 | 8 | 6 | 13 | -11 | 30 |
| 15 | FK Varnsdorf | 27 | 7 | 7 | 13 | -7 | 28 |
| 16 | Sigma Olomouc II | 27 | 5 | 6 | 16 | -21 | 21 |
- Czech Republic - Czech Liga
- Qualification for promotion play-offs
- Czech Republic - MSFL